FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30002079
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA327800.05.863732394-95
GCGTCGT174450.05.774699794-95
TCGTGTA147850.05.70481594-95
AGATCGG362550.05.59660494-95
ATCGGAA317600.05.461059694-95
GTCGTGT161050.05.44377594-95
AGCGTCG187350.05.36440194-95
CGTGTAG165000.05.29905594-95
CGTCGTG173500.05.21747194-95
TGTATCG58250.05.139361494-95
Produced by FastQC (version 0.11.5)