FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26853161
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG83000.05.610466594-95
AGCGTCG143700.05.505647794-95
GATCGGA243500.05.503020394-95
AGATCGG271350.05.358491494-95
GCGTCGT130100.05.131566594-95
ATCGGAA240550.05.10629894-95
Produced by FastQC (version 0.11.5)