FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21522362
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG125750.05.932320694-95
GCGTCGT112500.05.87077394-95
GATCGGA212150.05.800823794-95
TCGTGTA104150.05.702741694-95
AGATCGG238200.05.645178394-95
GAGCGTC154950.05.61167594-95
CGTCGTG110500.05.568528794-95
ATCGGAA208200.05.30609794-95
CGTGTAG109650.05.22169494-95
GTCGTGT105650.05.12705994-95
TAGATCG71500.05.049550592-93
AGAGCGT163750.05.034439694-95
Produced by FastQC (version 0.11.5)