FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18591968
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA156950.05.495042394-95
TCGAACG18300.05.452854694-95
CGTCGTG87350.05.331125394-95
ATCGGAA154600.05.271210794-95
GTCGTGT81100.05.243942394-95
TAGATCG54700.05.212183594-95
CGAACGT17757.2759576E-125.086405394-95
Produced by FastQC (version 0.11.5)