FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764616
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15691001
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG98400.06.01209294-95
GCGTCGT101700.05.93381794-95
GTCGTGT93350.05.77740694-95
AGCGTCG113250.05.664308594-95
TAGATCG65950.05.439807494-95
ATCGGAA186700.05.43381694-95
GATCGGA192950.05.368625694-95
TCGTGTA83450.05.323982794-95
AGATCGG211900.05.056697494-95
Produced by FastQC (version 0.11.5)