FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14575937
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA181900.05.875046394-95
ATCGGAA177450.05.674418494-95
AGATCGG199100.05.46293194-95
CGTCTGA82400.05.44710994-95
TCGGAAG184500.05.12249792-93
TAGATCG63550.05.11917692-93
ACACGTC95850.05.103952494-95
CGGAAGA191300.05.1022194-95
ACGTCTG90400.05.070144794-95
Produced by FastQC (version 0.11.5)