FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14575937
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG59500.05.94980894-95
GATCGGA181500.05.890736694-95
CGTCGTG90000.05.781430794-95
AGAGCGT131200.05.704405394-95
GTCGTGT84700.05.638275694-95
TCGTGTA75850.05.57417292-93
ATCGGAA173400.05.5630294-95
CGTGTAG84150.05.562189694-95
AGATCGG201200.05.479282494-95
GCGTCGT91000.05.430697494-95
TCGGAAG183650.05.26404392-93
GAGCGTC122800.05.26264794-95
AGCGTCG102500.05.14591794-95
CGGAAGA192950.05.036307394-95
Produced by FastQC (version 0.11.5)