FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16015915
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA100300.06.084909494-95
ATCGGAA221000.05.94230394-95
TAGATCG75900.05.69444794-95
ACACGTC123200.05.58996794-95
GATCGGA227950.05.542350394-95
TCGGAAG229100.05.255388394-95
AGATCGG250100.05.155942494-95
CACACGT145600.05.088797694-95
ACGTCTG112150.05.06081694-95
Produced by FastQC (version 0.11.5)