FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12519962
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG225050.06.35241294-95
GATCGGA204400.06.11119394-95
ACACGTC101800.05.925256394-95
ATCGGAA195050.05.588405694-95
CGTCTGA84650.05.582738494-95
CACACGT121800.05.53722694-95
TAGATCG68800.05.48819994-95
TCGGAAG195950.05.42942694-95
CACGTCT101800.05.248750794-95
CGGAAGA202950.05.18365294-95
GCACACG134600.05.116513794-95
GAGATCG88250.05.08590694-95
Produced by FastQC (version 0.11.5)