FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17136402
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG91750.06.31541694-95
GATCGGA270100.06.08414794-95
ATCGGAA260800.05.99151394-95
ACACGTC138750.05.88767294-95
CGTCTGA112600.05.88415494-95
ACGTCTG123950.05.824320394-95
AGATCGG295500.05.641541594-95
CACGTCT139250.05.37196994-95
TCGGAAG264350.05.336116394-95
CACACGT163300.05.27884294-95
AATCGCG6850.00120773145.200186394-95
CGGAAGA271750.05.00729694-95
Produced by FastQC (version 0.11.5)