FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15925968
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA247350.06.17334194-95
ATCGGAA240500.06.12206494-95
ACACGTC126850.05.822253794-95
AGATCGG270450.05.72508494-95
TAGATCG84050.05.5378394-95
TCGGAAG244250.05.32803794-95
CACGTCT126400.05.18541294-95
CACACGT147800.05.173716594-95
CGTCTGA102350.05.12773694-95
CGGAAGA246900.05.01115594-95
Produced by FastQC (version 0.11.5)