FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15925968
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG136150.06.4042794-95
GATCGGA248000.06.198317594-95
ATCGGAA237050.06.133843494-95
GTCGTGT112750.06.110864694-95
CGTCGTG118350.06.102763794-95
TCGTGTA101500.05.828469894-95
GAGCGTC161050.05.82716994-95
AGATCGG270500.05.81449494-95
GCGTCGT122350.05.78673494-95
CGTGTAG102100.05.631328694-95
TAGATCG80100.05.515458692-93
AAGAGCG191500.05.359647394-95
TCGGAAG241450.05.352946894-95
AGAGCGT170900.05.296684794-95
Produced by FastQC (version 0.11.5)