FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15962784
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG106450.06.048357594-95
GCGTCGT96350.05.94263694-95
GATCGGA189450.05.831390494-95
TCGTGTA79650.05.78668494-95
CGTGTAG83900.05.69177794-95
CGATCTA10050.00635605075.6709648
TAGATCG60050.05.657659594-95
AGATCGG208700.05.60088294-95
CGTCGTG93200.05.480704394-95
ATCGGAA183300.05.46970394-95
TCCGATC14052.9041184E-45.4087596
GAGCGTC128900.05.23454894-95
GTCGTGT89850.05.18157792-93
AAGAGCG158400.05.15961294-95
AGAGCGT137100.05.06010194-95
Produced by FastQC (version 0.11.5)