FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19936380
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA130750.06.196034494-95
CGTCGTG157400.06.06767794-95
AGCGTCG179800.06.051693494-95
ATCGGAA308600.06.01251694-95
GATCGGA321500.06.007734394-95
GCGTCGT163050.05.973985794-95
CGTGTAG135300.05.882313394-95
GTCGTGT145550.05.8108494-95
AGATCGG351350.05.47028294-95
AAGAGCG253200.05.442085794-95
TAGATCG103950.05.348013494-95
TCGGAAG316600.05.33531294-95
GAGCGTC210050.05.281962494-95
AGAGCGT225350.05.060399594-95
Produced by FastQC (version 0.11.5)