FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21806673
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA332950.05.62044594-95
TAGATCG114400.05.604814594-95
AGATCGG378900.05.578133694-95
ACACGTC181800.05.551604794-95
GATCGGA347500.05.47395494-95
CACACGT215050.05.32268994-95
TCGGAAG344600.05.306387494-95
CGTCTGA148800.05.298569794-95
ACGTCTG166100.05.118431694-95
CGGAAGA349800.05.00346994-95
Produced by FastQC (version 0.11.5)