FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21806673
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT177800.06.187043794-95
CGTCGTG172950.06.099530794-95
GTCGTGT160150.05.949102494-95
AGCGTCG193700.05.887698794-95
TCGTGTA144100.05.67189894-95
GAGCGTC230500.05.64863694-95
ATCGGAA335450.05.56001494-95
AGATCGG381650.05.55930194-95
AGAGCGT244950.05.422110694-95
GATCGGA348950.05.41980794-95
AAGAGCG276300.05.37443994-95
TAGATCG116700.05.354499394-95
TCGGAAG343250.05.31599694-95
CGTGTAG148350.05.2371494-95
Produced by FastQC (version 0.11.5)