FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20103582
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA253100.05.84547994-95
ATCGGAA245350.05.701031794-95
TAGATCG84050.05.50961394-95
AGATCGG276850.05.489839694-95
ACACGTC140600.05.489366594-95
CGTCTGA113550.05.37489794-95
TCGGAAG255550.05.25045394-95
CACGTCT142550.05.214363694-95
ACGTCTG127800.05.18438994-95
Produced by FastQC (version 0.11.5)