FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23309856
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGATC34400.06.2131994-95
GTACGAT38400.06.060736794-95
ATCGGAA391200.05.961330494-95
GATCGGA404950.05.87620494-95
CGTCTGA172450.05.535966494-95
AGATCGG436750.05.50816794-95
TAGATCG137500.05.49230994-95
TCGGAAG394550.05.483361794-95
ACGTCTG189600.05.335828394-95
ACACGTC209150.05.302608594-95
CACACGT243750.05.114995594-95
CGGAAGA398750.05.03848894-95
CACGTCT210600.05.018018294-95
Produced by FastQC (version 0.11.5)