FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22671190
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA326150.05.55560794-95
AGATCGG357000.05.50125494-95
ACACGTC175900.05.46781294-95
ATCGGAA314850.05.34015694-95
CGTCTGA144550.05.20793594-95
ACGTCTG161200.05.18563594-95
TAGATCG106450.05.153362894-95
CACGTCT179050.05.07982694-95
CACACGT210000.05.04359294-95
Produced by FastQC (version 0.11.5)