FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24588017
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA323500.05.73332794-95
AGATCGG352650.05.649994494-95
ATCGGAA311900.05.504943494-95
TAGATCG109000.05.403250794-95
CGTCTGA146350.05.273762794-95
ACGTCTG162800.05.22226194-95
ACACGTC176200.05.13510294-95
CACACGT212500.05.10725194-95
TCGGAAG327800.05.027828794-95
Produced by FastQC (version 0.11.5)