FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24588017
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG162100.05.994767794-95
GCGTCGT164550.05.84775694-95
GATCGGA324300.05.74382594-95
AGCGTCG181900.05.70795894-95
AGATCGG355250.05.624630594-95
GTCGTGT150900.05.58947794-95
TAGATCG110500.05.56890294-95
ATCGGAA311850.05.49315294-95
TCGTGTA136850.05.295257694-95
CGTGTAG144350.05.18472694-95
AGAGCGT234950.05.106789694-95
GAGCGTC219600.05.10671694-95
TCGGAAG326950.05.10138294-95
Produced by FastQC (version 0.11.5)