FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20625746
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA95950.05.76803994-95
AGCGTCG113950.05.58647494-95
GTCGTGT98650.05.369391494-95
GATCGGA197400.05.366671694-95
AGATCGG218050.05.337738594-95
AGAGCGT151650.05.24710494-95
GCGTCGT103050.05.209211392-93
TAGATCG66450.05.18310994-95
AAGAGCG169550.05.113430594-95
CGTGTAG98450.05.066649494-95
ATCGGAA192750.05.02785994-95
Produced by FastQC (version 0.11.5)