FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22290957
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA221050.05.587697594-95
ATCGGAA216350.05.335798794-95
AGATCGG243400.05.29906694-95
GTCGTGT111450.05.264255594-95
AGCGTCG127450.05.23704894-95
TAGATCG74450.05.23237994-95
TCGTGTA101650.05.210957594-95
GCGTCGT114250.05.13517292-93
GAGCGTC155450.05.088310294-95
CGTCGTG113100.05.061444894-95
TCGGAAG231300.05.052537494-95
Produced by FastQC (version 0.11.5)