FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21684228
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT110550.05.715205792-93
GTCGTGT107750.05.687585494-95
GATCGGA206300.05.607318494-95
CGTCGTG110450.05.48403294-95
ATCGGAA204500.05.28498394-95
TCGTGTA97350.05.221596794-95
AGCGTCG120200.05.15756992-93
Produced by FastQC (version 0.11.5)