FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27906941
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT137400.06.137117494-95
AGCGTCG152700.05.848865594-95
CGTCGTG136800.05.67785794-95
GATCGGA261600.05.6659194-95
AGATCGG288850.05.452101794-95
ATCGGAA254550.05.29093994-95
GTCGTGT127400.05.20184794-95
CGACGAA34100.05.154564492-93
TCGTGTA116750.05.147382394-95
Produced by FastQC (version 0.11.5)