FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30175232
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTAAT31200.06.69818194-95
TCGCTAA35500.05.819956394-95
TAGATCG119350.05.71068694-95
ACACGTC197550.05.39756894-95
AGATCGG377100.05.384413794-95
GATCGGA341300.05.32992894-95
ATCGGAA333350.05.15782994-95
ATCGCTA44900.05.07754494-95
Produced by FastQC (version 0.11.5)