FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21623847
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA220750.05.35750194-95
GATCGGA221300.05.343722392-93
TCGCGTA7204.1209825E-45.27715790-91
TCGGAAG236250.05.186943594-95
TAGATCG78200.05.101701790-91
ACACGTC129150.05.075143394-95
Produced by FastQC (version 0.11.5)