FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17299102
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG46450.05.67615594-95
GCGTCGT74250.05.56634194-95
AGATCGG150350.05.49784994-95
AGCGTCG81800.05.45910694-95
GATCGGA132650.05.40775194-95
TCGTGTA63650.05.261840394-95
GTCGTGT70100.05.014881694-95
Produced by FastQC (version 0.11.5)