FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15796885
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA195600.05.390636494-95
AGATCGG218050.05.369289494-95
TAGATCG68850.05.34630594-95
ATCGGAA189800.05.305124894-95
ACACGTC111650.05.08352794-95
TCGGAAG204450.05.052753494-95
Produced by FastQC (version 0.11.5)