FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19439080
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG167750.05.621486794-95
GATCGGA150650.05.51851394-95
TAGATCG52650.05.098040694-95
ATCGGAA148350.05.05967694-95
Produced by FastQC (version 0.11.5)