FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16000620
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA90800.06.121430494-95
GTCGTGT90350.05.678694794-95
GATCGGA183950.05.59127794-95
AGAGCGT140300.05.570076594-95
GAGCGTC132400.05.54361994-95
AGCGTCG107950.05.36895994-95
CGTCGTG96100.05.363635594-95
GCGTCGT97600.05.354214794-95
AGATCGG200750.05.33634594-95
CGTGTAG92750.05.27565394-95
ATCGGAA178800.05.127937394-95
Produced by FastQC (version 0.11.5)