FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16129287
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA234250.05.393277694-95
AGATCGG253600.05.3282494-95
ACACGTC124600.05.260315494-95
ATCGGAA227550.05.22855494-95
CACACGT147300.05.20739594-95
CGGAAGA243000.05.101063392-93
GCACACG168600.05.042503494-95
Produced by FastQC (version 0.11.5)