FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16129287
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT116950.06.64159394-95
AGCGTCG132200.06.4144894-95
CGTCGTG114050.06.18565894-95
AAGAGCG192200.05.610831394-95
TCGTGTA94600.05.57425194-95
GTCGTGT106700.05.565450794-95
TAGATCG74750.05.49742994-95
GAGCGTC155400.05.41099394-95
GATCGGA234350.05.40240394-95
AGAGCGT166150.05.30393694-95
AGATCGG255700.05.27645694-95
ATCGGAA225100.05.244518894-95
CGGAAGA242050.05.14207292-93
Produced by FastQC (version 0.11.5)