FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17275586
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA284150.06.27653894-95
AGATCGG310900.06.087871694-95
CGTCTGA119550.06.058681594-95
ATCGGAA274450.06.00515394-95
ACACGTC143950.05.939073694-95
ACGTCTG130150.05.85718294-95
TAGATCG94800.05.836808794-95
CACACGT171150.05.494727694-95
CACGTCT143950.05.411155794-95
TCGGAAG279450.05.3368394-95
CGGAAGA285350.05.076680794-95
Produced by FastQC (version 0.11.5)