FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17275586
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG137450.06.445845694-95
CGTGTAG116900.06.278555494-95
GATCGGA285050.06.25798794-95
GTCGTGT129550.06.25219894-95
GCGTCGT141950.06.090904794-95
ATCGGAA272000.06.04300594-95
TCGTGTA116650.06.02729994-95
AGATCGG314300.05.97788994-95
AGCGTCG155400.05.930570694-95
GAGCGTC180350.05.623769894-95
TAGATCG92300.05.610194-95
TACTCGA37450.05.454593794-95
AGAGCGT193050.05.43836494-95
TCGGAAG279550.05.378485794-95
CGGAAGA284800.05.22095794-95
AAGATCG105700.05.10113394-95
GTGTAGG147050.05.055860594-95
Produced by FastQC (version 0.11.5)