FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13053667
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA111600.06.321480894-95
CTAGTCG22750.06.26464494-95
GTCGTGT123250.06.18649594-95
CGTGTAG113200.05.79147594-95
TAGTCGT23400.05.684583794-95
CGTCGTG118150.05.528562592-93
GCGTCGT122150.05.40585792-93
GATCGGA233600.05.34859294-95
AGAGCGT166650.05.34505994-95
AAGAGCG184700.05.32426994-95
AGCGTCG132800.05.27655594-95
ATCGGAA226050.05.222499494-95
AGATCGG253600.05.132841694-95
TCGGAAG232550.05.045882794-95
Produced by FastQC (version 0.11.5)