FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16064053
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT126400.06.069815694-95
GATCGGA254800.05.975560794-95
ATCGGAA245550.05.891113394-95
TCGTGTA104200.05.858486794-95
AGCGTCG140900.05.78233494-95
CGTGTAG106800.05.693623594-95
TAGATCG86850.05.634007594-95
AGATCGG277800.05.609080394-95
TCGGAAG251700.05.548992694-95
CGTCGTG122500.05.54561994-95
GAGCGTC165300.05.460479794-95
GTCGTGT116300.05.453202294-95
AGAGCGT180200.05.4044294-95
CGGAAGA259050.05.235673494-95
AAGAGCG196050.05.12499694-95
Produced by FastQC (version 0.11.5)