FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16047558
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC15151.5334081E-97.21044546
ATCGGAA190350.05.914953794-95
GATCGGA195950.05.770155494-95
GCGTCGT100600.05.76126394-95
TAGATCG62700.05.682632494-95
CGTCGTG98150.05.542057594-95
TCGTGTA85550.05.38651194-95
GTCGTGT92900.05.31830894-95
AGCGTCG111900.05.264382494-95
AGATCGG214900.05.22809992-93
TCGGAAG200850.05.132674794-95
CCGATCT23353.4879486E-75.0851067
CGTGTAG89350.05.051008792-93
Produced by FastQC (version 0.11.5)