FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14682820
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA186800.06.22944294-95
AGATCGG203100.05.893191394-95
ATCGGAA177900.05.753488594-95
TAGATCG63600.05.414281494-95
TCGGAAG185600.05.20770594-95
Produced by FastQC (version 0.11.5)