FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21822440
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA351650.05.99682594-95
AGATCGG386250.05.859268794-95
TAGATCG120750.05.5260592-93
ATCGGAA338700.05.524971594-95
CGTCTGA153450.05.27723694-95
ACGTCTG167850.05.26308894-95
ACACGTC184050.05.135305494-95
AAGATCG123400.05.0997694-95
TCGGAAG348400.05.098500794-95
CGCGTAT6600.0042809785.03736294-95
CGGAAGA358100.05.006816494-95
Produced by FastQC (version 0.11.5)