FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21822440
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG198150.06.125488394-95
GCGTCGT177850.06.11681794-95
GATCGGA353400.06.00203994-95
AGATCGG388150.05.844194-95
CGTGTAG162900.05.686661794-95
TAGATCG116600.05.66317794-95
AGAGCGT248050.05.63056594-95
CGTCGTG171100.05.594598394-95
GAGCGTC232150.05.586474494-95
ATCGGAA336950.05.57602894-95
TCGTGTA147400.05.49503994-95
GTCGTGT161600.05.40904294-95
AAGAGCG274750.05.22171494-95
TCGGAAG346550.05.140546394-95
CGGAAGA353400.05.087954594-95
Produced by FastQC (version 0.11.5)