FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22031637
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA360700.05.78719794-95
CGTCTGA157900.05.775301594-95
TAGATCG125600.05.76681294-95
GATCGGA372250.05.696948594-95
AGATCGG407250.05.656348794-95
ACACGTC193100.05.644896594-95
ACCGTAC40000.05.639778692-93
ACGTCTG174400.05.610173794-95
TCGGAAG366550.05.254279694-95
CACGTCT193350.05.2322894-95
CGTACAA39950.05.052748794-95
CACACGT225150.05.052299594-95
Produced by FastQC (version 0.11.5)