FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22031637
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA152800.06.14046994-95
CGTGTAG154950.06.10125794-95
GTCGTGT171100.05.997379394-95
AGCGTCG206400.05.96139594-95
AGAGCGT260950.05.853039794-95
ATCGGAA356650.05.83431294-95
CGTCGTG183450.05.787854794-95
GCGTCGT189500.05.778558794-95
GATCGGA372050.05.71412294-95
AGATCGG406650.05.677711594-95
TAGATCG119700.05.635753694-95
GAGCGTC240150.05.578588594-95
AAGAGCG292050.05.54695994-95
TCGGAAG365950.05.25115294-95
Produced by FastQC (version 0.11.5)