FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20220607
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG129350.06.298795794-95
GCGTCGT132650.06.28535394-95
GATCGGA264900.06.12447194-95
ATCGGAA254450.06.105273294-95
AGCGTCG146250.05.91201294-95
AGATCGG291800.05.51103594-95
GAGCGTC178650.05.47802594-95
TCGTGTA109100.05.399366492-93
CGTGTAG113300.05.367102694-95
TAGATCG91300.05.28147394-95
GTCGTGT122650.05.190355394-95
TCGGAAG262200.05.163830894-95
AGAGCGT187650.05.101363794-95
AAGATCG106350.05.02544994-95
Produced by FastQC (version 0.11.5)