FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23521296
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA175900.05.92679694-95
TAGATCG139750.05.89656394-95
GATCGGA415800.05.83697394-95
AGATCGG452600.05.766395694-95
GTACGAT35600.05.46997294-95
ATCGGAA400050.05.419731694-95
TCGGAAG406650.05.39016794-95
CGGAAGA412650.05.277263694-95
ACACGTC213300.05.25499794-95
ACGTCTG194300.05.243056392-93
GGTACGA44800.05.19480694-95
GCACACG278450.05.12564594-95
CACGTCT213300.05.087994694-95
CACACGT247200.05.053107794-95
Produced by FastQC (version 0.11.5)