FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22863245
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG161350.06.256610494-95
GCGTCGT167000.06.17294594-95
TCGTGTA135350.06.12472194-95
GATCGGA330600.05.934666694-95
GTCGTGT150400.05.85929394-95
AGCGTCG184100.05.664086394-95
ATCGGAA317700.05.652280394-95
TAGATCG113150.05.64698894-95
AGATCGG364950.05.59086494-95
CGTGTAG136900.05.56955894-95
TCGGAAG328350.05.389374794-95
AGAGCGT233350.05.30333594-95
GAGCGTC219850.05.229233394-95
AAGAGCG262200.05.154644594-95
CGGAAGA337750.05.091694494-95
Produced by FastQC (version 0.11.5)