FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21288572
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG128550.06.023854794-95
ATCGGAA219050.05.638830794-95
GATCGGA225900.05.59402594-95
GCGTCGT115050.05.574502594-95
AGAGCGT168050.05.34296494-95
AGATCGG247800.05.272181594-95
GAGCGTC156100.05.234612594-95
TCGTGTA98600.05.17953294-95
GTCGTGT107400.05.131126494-95
TAGATCG76400.05.03675294-95
Produced by FastQC (version 0.11.5)