FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38093409
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA236850.06.076589694-95
AGATCGG267850.06.04718794-95
GCGTCGT115850.05.842644794-95
AGCGTCG128950.05.580613694-95
TAGATCG84900.05.566805494-95
ATCGGAA234800.05.563207694-95
CGTCGTG118150.05.527893594-95
TCGTGTA100800.05.13637494-95
GTCGTGT116400.05.019295794-95
AGAGCGT187500.05.01596694-95
Produced by FastQC (version 0.11.5)