FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26940940
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA198000.06.02086694-95
GATCGGA200150.05.89686694-95
AGATCGG226000.05.83183294-95
TCGGAAG217600.05.544026494-95
TAGATCG69700.05.45139594-95
Produced by FastQC (version 0.11.5)