FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34466278
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA235750.06.305867794-95
GATCGGA240650.06.30575694-95
AGATCGG269650.06.05912994-95
TCGGAAG265150.05.418585394-95
TAGATCG85650.05.40666594-95
Produced by FastQC (version 0.11.5)